Run a plugin manually from the sequencing run report

Under the Data tab, in the Completed Runs & Reports screen, click the link for your completed sequencing run.

In the Run Summary, click the Plugin Summary link, or scroll down to the Plugin Summary tab.

The Plugin Summary lists any plugins that have completed analysis on your run.

Click Refresh plugin status to update the analysis status of all plugins listed.

Click Select Plugins to Run, then click the name of the plugin that you want to run.

Configure the plugin if necessary. If you are prompted for input, select the desired plugin options, then click Submit to start the analysis. For detailed plugin configuration information for available plugins, see Pre-installed plugins.

Note:

If the plugin does not accept configuration, it starts analysis immediately, without a confirmation screen. To cancel a plugin run that is in progress, click Stop. You can also click Close to close the Select a plugin screen without running a plugin.