Test fragment metrics
The Test Fragments report displays the following information:
|
Parameter |
Description |
|---|---|
|
Test Fragment |
Test fragment name (defined in the Admin > References tab of Torrent Browser). |
|
Reads |
Number of filtered & trimmed reads identified for this test fragment. |
|
Percentage 50AQ17 |
The percentage of reads for this test fragment with a minimum of 50 base pairs in length and an error rate of 1 in 50, Phred-like 17, or better. Quality is based on alignment, not predicted quality. |
The test fragment sequence is also shown in the read length histogram.