Torrent Suite Software 5.4 Help

Update Reference Library Indices

Note:

When you upgrade your Torrent Suite™ Software from a version earlier than 3.0, you must rebuild your reference indices. This process can take a few hours for larger reference genomes. Your users should not submit data analysis jobs while the reference indices are being rebuilt.

Follow these steps to rebuild your reference genome indices:

  1. Log in with an ionadmin account.
  2. Ensure that users do not submit analyses while the rebuild is in progress.
  3. Click Settings () > References option:
  4. Click the Rebuild All Now button:

    The TMAP index version used in 3.x and 4.x releases is tmap-f3.