Review run results — coverageAnalysis plugin

After your sequencing run completes, review results in the Run Summary.

In the Data tab, click Completed Runs & Reports, then search for your run.
Click the Report Name link to open the Run Summary screen for your run.
In the Run Summary, click the Plugin Summary link, or scroll down to the Plugin Summary tab.
The Plugin Summary lists any plugins that have completed analysis on your run.
Scroll down to the coverageAnalysis section, then click the coverageAnalysis.html link to open the Coverage Analysis plugin report.
To download statistics files and the aligned reads BAM file, click the file links at the bottom of the coverageAnalysis plugin report.
See coverageAnalysis plugin report for details about the plugin results.