View Coverage Metrics
These columns are displayed in the run report in the View Coverage Metrics tab:
|
Column |
Description |
|---|---|
|
Coverage |
Total coverage at this position, after downsampling |
|
Coverage + |
Total coverage on the forward strand, after downsampling |
|
Coverage - |
Total coverage on the reverse strand, after downsampling |
|
Allele Cov |
The number of reads that contain this allele, after downsampling |
|
Allele Cov + |
Allele coverage on the forward strand, after downsampling |
|
Allele Cov - |
Allele coverage on thereverse strand, after downsampling |
|
Strand bias |
Discrepancy between allele frequencies on the forward and reverse strands |