JavaScript must be enabled in order to use this site.Please enable JavaScript in your browser and refresh the page. Global pairing options Option alternate option Type Default Description -Q --pairing INT 0 The insert pairing: 0 Do not perform pairing 1 Mate pairs (-S 0 -P 1) 2 Paired end (-S 1 -P 0) INT -1 INT -1 FLOAT -1.0 FLOAT -1.0 Parent topic: TMAP Modules